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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs591283 chr11:77582743 C/T INTS4L1 chr7:64601603-64694600:+ 0.43 7.78 4.46E-14 Box Plot
THCA rs591346 chr8:9818065 C/T SGK223 chr8:8175258-8244008:- 0.38 6.97 1.03E-11 Box Plot
THCA rs59149821 chr11:48967332 A/C FOLH1B chr11:89372395-89431886:+ 0.45 6.54 1.55E-10 Box Plot
THCA rs59178038 chr8:11789037 G/A SGK223 chr8:8175258-8244008:- -0.45 -8.39 5.45E-16 Box Plot
THCA rs59181828 chr6:28120347 T/TA BTN3A2 chr6:26365387-26378548:+ -0.3 -6.3 6.95E-10 Box Plot
THCA rs59183971 chr14:66773349 C/A ATP6V1D chr14:67761088-67826982:- 0.44 7.82 3.29E-14 Box Plot
THCA rs59187325 chr7:65480934 C/A ZNF117 chr7:64432154-64467062:- 0.27 6.16 1.58E-9 Box Plot
THCA rs59191504 chr8:11785081 A/G SGK223 chr8:8175258-8244008:- 0.37 6.88 1.87E-11 Box Plot
THCA rs59236728 chr2:101120345 C/A LOC285359 chr3:101431278-101432259:+ 0.34 6.61 1.05E-10 Box Plot
THCA rs59255451 chr2:101127732 CA/C LOC285359 chr3:101431278-101432259:+ 0.34 6.61 1.05E-10 Box Plot
THCA rs59287733 chr8:9817344 G/GA SGK223 chr8:8175258-8244008:- 0.38 7.07 5.41E-12 Box Plot
THCA rs59308022 chr7:66307035 G/A CCT6P1 chr7:65216129-65228341:+ 0.43 6.69 6.41E-11 Box Plot
THCA rs59318790 chr16:20449384 T/C ZMYND12 chr1:42896000-42921938:- 0.26 5.91 6.65E-9 Box Plot
THCA rs593297 chr17:18268768 A/G LOC162632 chr17:16614993-16707819:+ 0.34 5.89 7.32E-9 Box Plot
THCA rs59363341 chr10:51810982 C/A FAM21B chr10:47894023-47949412:+ 0.71 14.49 1.04E-39 Box Plot